PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0003s0164.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 303aa    MW: 33605.9 Da    PI: 9.2969
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0003s0164.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.24.9e-1442126280
             trihelix   2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                          Wt  e l++ + rre+ er  +g      ++++ +W+++ ++++++g++rs+ qC++kwe ++ ++kk+++ ek   +++ s ++
  Mapoly0003s0164.1.p  42 WTVAELLVMQASRREDFERQAKGgigekhRSAQERWRWIEDQCWAQGVKRSAAQCQDKWECIAAEFKKVNDYEKAIPPGQPSYWQ 126
                          88888888888888777777765333333599******************************************98776666654 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.1E-1041127No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MAGYDPTTPG GMSQDNAVMV LAAGSMGDSD NPKNRSHRKG MWTVAELLVM QASRREDFER  60
QAKGGIGEKH RSAQERWRWI EDQCWAQGVK RSAAQCQDKW ECIAAEFKKV NDYEKAIPPG  120
QPSYWQMGSD DKKKYKLPPN FHEEVFLALR DWYGKTNLRS IEPVTILFDT PAPSRAGGTD  180
LITGGFHGNS AAANLDFSGS PGGESDENDT GRSSKRRKSM IKMADSLAAV LERNNKNMVA  240
ALRESEKRKD IRHQKTLDFE REKLKATMEL QLQLGNGYIG ALAKIGDGLD KIGSAMWAHG  300
RP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001757195.11e-103predicted protein
TrEMBLA9RSN11e-103A9RSN1_PHYPA; Predicted protein
STRINGPP1S26_50V6.11e-102(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18811637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.16e-20Trihelix family protein